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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV19863954 hCoV-19/deer/USA/IL-22-007926-005/2022 EPI_ISL_16372322 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-02 Odocoileus virginianus 29857 2023-01-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29853 99.99
OEAV19863987 hCoV-19/deer/USA/MA-22-006202-009/2021 EPI_ISL_16384470 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-03 Odocoileus virginianus 29790 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29790 100.00
OEAV19863988 hCoV-19/deer/USA/MA-22-006202-022/2021 EPI_ISL_16384474 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29818 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29818 100.00
OEAV19864020 hCoV-19/deer/USA/NC-22-006202-020/2021 EPI_ISL_16384472 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-13 Odocoileus virginianus 29732 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28730 96.63
OEAV19864024 hCoV-19/deer/USA/NC-22-006202-063/2021 EPI_ISL_16384483 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-13 Odocoileus virginianus 29363 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 27960 95.22
OEAV19864040 hCoV-19/deer/USA/NJ-22-006202-062/2021 EPI_ISL_16384482 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-09 Odocoileus virginianus 29686 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 26089 87.88
OEAV19864043 hCoV-19/deer/USA/NJ-22-006202-085/2021 EPI_ISL_16384487 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-09 Odocoileus virginianus 29803 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28359 95.15
OEAV19864047 hCoV-19/deer/USA/NJ-22-007926-008/2022 EPI_ISL_16388462 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-13 Odocoileus virginianus 29804 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29804 100.00
OEAV19864050 hCoV-19/deer/USA/NJ-22-007926-030/2022 EPI_ISL_16388468 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-31 Odocoileus virginianus 29777 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29490 99.04
OEAV19864094 hCoV-19/deer/USA/NY-22-006202-017/2021 EPI_ISL_16384471 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-28 Odocoileus virginianus 29806 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29806 100.00
OEAV19864101 hCoV-19/deer/USA/NY-22-006202-045/2021 EPI_ISL_16384480 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29767 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29688 99.73
OEAV19864108 hCoV-19/deer/USA/NY-22-006202-094/2021 EPI_ISL_16384488 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-23 Odocoileus virginianus 29830 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 26319 88.23
OEAV19864132 hCoV-19/deer/USA/TN-22-007926-007/2021 EPI_ISL_16388461 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-12 Odocoileus virginianus 29787 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29781 99.98
OEAV19864136 hCoV-19/deer/USA/TN-22-007926-019/2021 EPI_ISL_16388465 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-20 Odocoileus virginianus 29780 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29779 100.00
OEAV19864138 hCoV-19/deer/USA/TN-22-007926-022/2021 EPI_ISL_16388466 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-09 Odocoileus virginianus 29738 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29736 99.99
OEAV19864139 hCoV-19/deer/USA/TN-22-007926-024/2021 EPI_ISL_16388467 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-12 Odocoileus virginianus 29783 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29780 99.99
OEAV19864142 hCoV-19/deer/USA/WV-22-007926-015/2022 EPI_ISL_16388463 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-25 Odocoileus virginianus 29835 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29830 99.98
OEAV19864143 hCoV-19/deer/USA/WV-22-007926-018/2022 EPI_ISL_16388464 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-25 Odocoileus virginianus 29778 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29530 99.17
OEAV19864144 hCoV-19/deer/USA/WV-22-007927-001/2022 EPI_ISL_16388470 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-24 Odocoileus virginianus 29774 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29526 99.17
OEAV19864145 hCoV-19/deer/USA/WV-22-007927-002/2022 EPI_ISL_16388471 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-31 Odocoileus virginianus 29772 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29770 99.99
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